1. Cheng, Y., Wang, X., Cao, L., Ji, J., Liu, T., & Duan, K. (2021). Highly efficient Agrobacterium rhizogenes-mediated hairy root transformation for gene functional and gene editing analysis in soybean. Plant Methods, 17, 1-12. doi.org/10.1186/s13007-021-00778-7 [DOI:10.1186/s13007-021-00778-7] [PMID] [PMCID]

2. Georgiev, M. I., Pavlov, A. I., & Bley, T. (2007). Hairy root type plant in vitro systems as sources of bioactive substances. Applied microbiology and biotechnology, 74, 1175-1185. doi.org/10.1007/s00253-007-0856-5 [DOI:10.1007/s00253-007-0856-5] [PMID]

3. Hosseinzadeh, S., Kukhdan, A. J., Hosseini, A., & Armand, R. (2015). The Application of Thymus vulgaris in Traditional and Modern Medicine : A Review. 9(3), 260-266. doi.org/10.5829/idosi.gjp.2015.9.3.94246

4. Jilani, S., Ferjeni, M., Al-Shammery, K., Rashid Mohammed AlTamimi, H., Besbes, M., Ahmed Lotfi, S., ... & Ben Selma, W. (2025). The synergistic effect of Thymus vulgaris essential oil and carvacrol with imipenem against carbapenem-resistant Acinetobacter baumannii: in vitro, molecular docking, and molecular dynamics studies. Frontiers in Pharmacology, 16, 1582102.‏ doi.org/10.3389/fphar.2025.1582102 [DOI:10.3389/fphar.2025.1582102] [PMID] [PMCID]

5. Jodaki, F., Sadat Noori, S. A., Mortazavian, S. M. M., & Mahmoudi, M. (2024). Optimization of hairy root induction in the medicinal plant Bilhar (Dorema aucheri) using Agrobacterium rhizogenes for the production of secondary metabolites. Genetic Engineering and Biosafety Journal, 13 (2) :180-189.‏2025. Doi: 10.61882/gebsj.13.2.2 [In Persian] [DOI:10.61882/gebsj.13.2.2]

6. Kiselev, K. V., Dubrovina, A. S., Veselova, M. V., Bulgakov, V. P., Fedoreyev, S. A., & Zhuravlev, Y. N. (2007). The rolB gene-induced overproduction of resveratrol in Vitis amurensis transformed cells. Journal of biotechnology, 128(3), 681-692. doi: 10.1016/j.jbiotec.2006.11.008 [DOI:10.1016/j.jbiotec.2006.11.008] [PMID]

7. Kubica, P., Szopa, A., Kokotkiewicz, A., Miceli, N., Taviano, M. F., Maugeri, A., ... & Ekiert, H. (2020). Production of verbascoside, isoverbascoside and phenolic acids in callus, suspension, and bioreactor cultures of Verbena officinalis and biological properties of biomass extracts. Molecules, 25(23), 5609. doi.org/10.3390/molecules25235609 [DOI:10.3390/molecules25235609] [PMID] [PMCID]

8. Liu, L., Qu, J., Wang, C., Liu, M., Zhang, C., Zhang, X., ... & Zhang, S. (2024). An efficient genetic transformation system mediated by Rhizobium rhizogenes in fruit trees based on the transgenic hairy root to shoot conversion. Plant Biotechnology Journal, 22(8), 2093-2103.‏ doi.org/10.1111/pbi.14328 [DOI:10.1111/pbi.14328] [PMID] [PMCID]

9. Mahmoudi, M., Sadat-Noori, S.A., Ebrahimi, M., & Bahmankar, M. (2023). Optimization of induction of hairy roots in Perilla. Genetic Engineering and Biosafety Journal; 12 (1) doi: 20.1001.1.25885073.1402.12.1.4.8. [In Persian]

10. Majedi, S., Yassen, A. O., & Issa, S. Y. (2024). Assessing the combination of three plant species: Thyme (Thymus vulgaris), Damask Rose (Rosa damascena), and Stachys lavandulifolia vahl, to determine their synergistic effects on antimicrobial properties. Chemical Review and Letters, 7(2), 294-310.‏ doi.org/10.22034/crl.2024.437005.1286

11. Majumdar, S., Garai, S., & Jha, S. (2011). RETRACTED ARTICLE: Genetic transformation of Bacopa monnieri by wild type strains of Agrobacterium rhizogenes stimulates production of bacopa saponins in transformed calli and plants. Plant Cell Reports, 30(5), 941-954.‏ doi:10.1007/s00299-011-1035-9 [DOI:10.1007/s00299-011-1035-9] [PMID]

12. Moradi, N., Sadat Noori, S. A., Fadavi, A., Mortazavian, S. M. M., & Pakdin Parizi, A. (2021). Analysis efficiency of Iranian Ajowan ecotypes on hairy root production mediated by different Agrobacterium rhizogenesis strains. Iranian Journal of Genetics and Plant Breeding, 10(1), 117-127. doi: 10.30479/IJGPB.2022.17488.1325.

13. Oksman-Caldentey, K. M., & Hiltunen, R. (1996). Transgenic crops for improved pharmaceutical products. Field crops research, 45(1-3), 57-69. doi: 10.1016/0378-4290(95)00059-3 [DOI:10.1016/0378-4290(95)00059-3]

14. Paolis, A. D., Frugis, G., Giannino, D., Iannelli, M. A., Mele, G., Rugini, E., ... & Caretto, S. (2019). Plant cellular and molecular biotechnology: following Mariotti's steps. Plants, 10;8(1), 18.‏ doi: 10.3390/plants8010018 [DOI:10.3390/plants8010018] [PMID] [PMCID]

15. Soltaninezhad, N., Sadat-Noori, S. A., Izady-Darbandi, A., Amini, F., & Mirjalili, M. H. (2023). Induction and study of hairy root growth pattern in Indian ginseng medicinal plant using Agrobacterium rhizogenes. Genetic Engineering and Biosafety Journal, 12(2), 184-194. dx.doi.org/10.61186/gebsj.12.2.184 [In Persian] [DOI:10.61186/gebsj.12.2.184]

16. Stepanova, A. Y., Malunova, M. V., Gladkov, E. A., Evsyukov, S. V., Tereshonok, D. V., & Solov'eva, A. I. (2022). Collection of hairy roots as a basis for fundamental and applied research. Molecules, 27(22), 8040. doi.org/10.3390/molecules27228040 [DOI:10.3390/molecules27228040] [PMID] [PMCID]

17. Tiwari, R. K., Trivedi, M., Guang, Z. C., Guo, G. Q., & Zheng, G. C. (2007). Genetic transformation of Gentiana macrophylla with Agrobacterium rhizogenes: growth and production of secoiridoid glucoside gentiopicroside in transformed hairy root cultures. Plant Cell Reports, 26(2), 199-210. doi: 10.1007/s00299-006-0236-0 [DOI:10.1007/s00299-006-0236-0] [PMID]

18. Wahyuni, D. K., Vidianti, F., Purnobasuki, H., Ermayanti, T. M., Prajoga, B., & Utami, E. S. W. (2015). Agrobacterium rhizogenes mediated hairy root induction in Justicia gendarussa Burm. f. Journal of Applied Environmental and Biological Sciences, 5(4), 87-93. doi:10.1186/s13007-021-00778-7 [DOI:10.1186/s13007-021-00778-7] [PMID] [PMCID]

19. Wirtu, S. F., Ramaswamy, K., Maitra, R., Chopra, S., Mishra, A. K., & Jule, L. T. (2024). Isolation, characterization and antimicrobial activity study of Thymus vulgaris. Scientific Reports, 14(1), 21573.‏ doi.org/10.1038/s41598-024-71012-2 [DOI:10.1038/s41598-024-71012-2] [PMID] [PMCID]